STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_26497Dual-specificity kinase. (270 aa)    
Predicted Functional Partners:
CDL12_26635
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.676
CDL12_14192
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.676
CDL12_30457
Non-specific serine/threonine protein kinase.
    
 
 0.500
CDL12_30122
Serine/threonine protein kinase.
    
 
0.500
CDL12_20067
(-)-lariciresinol reductase.
    
 
 0.500
CDL12_20069
(+)-pinoresinol reductase.
    
 
 0.500
CDL12_20068
(-)-lariciresinol reductase.
    
 
 0.500
CDL12_17285
Non-specific serine/threonine protein kinase.
    
 
 0.500
CDL12_10974
(+)-pinoresinol reductase.
    
 
 0.500
CDL12_07047
Serine/threonine protein kinase.
    
 
0.500
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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