STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_22340Uncharacterized protein. (98 aa)    
Predicted Functional Partners:
CDL12_28914
NOT2_3_5 domain-containing protein.
    
 
 0.610
CDL12_07005
Myosin assembly protein/sexual cycle protein.
  
 
   0.567
CDL12_05073
Myosin assembly protein/sexual cycle protein.
  
 
   0.566
CDL12_04149
Myosin assembly protein/sexual cycle protein.
  
 
   0.562
CDL12_21099
Uncharacterized protein.
  
     0.539
CDL12_28012
Uncharacterized protein.
  
     0.538
CDL12_07499
11-oxo-beta-amyrin 30-oxidase.
  
 
   0.538
CDL12_05926
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
     0.538
CDL12_03816
Uncharacterized protein.
  
     0.538
CDL12_00005
Remorin_C domain-containing protein.
  
     0.538
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.