STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_22149PAPA-1 domain-containing protein. (496 aa)    
Predicted Functional Partners:
CDL12_26157
Actin-related protein-Arp5p; Belongs to the actin family.
    
 0.973
CDL12_24177
RuvB-like helicase; Belongs to the RuvB family.
    
 0.948
CDL12_25989
Actin-related protein-Arp4p/Act3p; Belongs to the actin family.
    
 0.934
CDL12_24981
SNF2 family DNA-dependent ATPase.
    
  0.882
CDL12_27553
R-kappa-B.
  
  
  0.801
CDL12_27787
Uncharacterized protein; Belongs to the actin family.
    
 0.764
CDL12_26705
Actin-related protein-Arp6p; Belongs to the actin family.
    
 0.764
CDL12_12365
Uncharacterized protein.
     
  0.759
CDL12_23169
Histone H2B; Belongs to the histone H2B family.
    
   0.702
CDL12_21732
Histone H2B; Belongs to the histone H2B family.
    
   0.702
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.