STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_21210Serine/threonine protein kinase. (914 aa)    
Predicted Functional Partners:
CDL12_20320
Putative CXXC motif protein.
    
  0.586
CDL12_10644
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.546
CDL12_20099
mRNA splicing factor.
    
  0.539
CDL12_20224
Small nuclear ribonucleoprotein Sm D2.
    
 0.522
CDL12_14880
Translation elongation factor EF-1 gamma.
    
  0.514
CDL12_29665
Spliceosomal protein snRNP-U1A/U2B.
    
  0.478
CDL12_18181
Spliceosomal protein snRNP-U1A/U2B.
    
  0.478
CDL12_12592
Spliceosomal protein snRNP-U1A/U2B.
    
  0.478
CDL12_05317
Non-specific serine/threonine protein kinase.
    
  0.457
CDL12_05318
MEKK.
    
  0.457
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.