Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CDL12_19747 | CDL12_21016 | A0A2G9GR38 | A0A2G9GMA0 | NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.451 |
CDL12_21016 | CDL12_19747 | A0A2G9GMA0 | A0A2G9GR38 | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit. | 0.451 |
CDL12_21016 | CDL12_21857 | A0A2G9GMA0 | A0A2G9GJZ3 | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.451 |
CDL12_21016 | CDL12_27994 | A0A2G9GMA0 | A0A2G9G2H3 | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Mitochondrial ADP/ATP carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.411 |
CDL12_21857 | CDL12_21016 | A0A2G9GJZ3 | A0A2G9GMA0 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.451 |
CDL12_27994 | CDL12_21016 | A0A2G9G2H3 | A0A2G9GMA0 | Mitochondrial ADP/ATP carrier protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.411 |