STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_20389SNARE protein TLG1/Syntaxin 6; Belongs to the syntaxin family. (264 aa)    
Predicted Functional Partners:
CDL12_20404
Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase.
  
 
 0.872
CDL12_17198
Serine palmitoyltransferase.
  
 
 0.872
CDL12_13203
Serine palmitoyltransferase.
  
 
 0.872
CDL12_04245
Serine palmitoyltransferase.
  
 
 0.872
CDL12_17333
Sugar (Pentulose and hexulose) kinase.
  
 
 0.846
CDL12_17334
Sugar (Pentulose and hexulose) kinase.
  
 
 0.846
CDL12_23462
Dihydroxyacetone kinase/glycerone kinase.
  
 0.837
CDL12_02964
Putative dehydrogenase.
  
 
 0.820
CDL12_23347
Homogentisate phytyltransferase.
  
 
 0.819
CDL12_18815
Homogentisate phytyltransferase.
  
 
 0.819
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.