STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_20301Uncharacterized protein. (93 aa)    
Predicted Functional Partners:
CDL12_08020
NAC domain-containing protein.
  
     0.530
CDL12_11748
Uncharacterized protein.
  
     0.527
CDL12_01671
Uncharacterized protein.
  
     0.527
CDL12_28655
Uncharacterized protein.
  
     0.526
CDL12_03975
Uncharacterized protein.
  
     0.526
CDL12_05000
Uncharacterized protein.
  
     0.516
CDL12_00726
Uncharacterized protein.
  
     0.501
CDL12_21145
Uncharacterized protein.
  
     0.497
CDL12_21067
Uncharacterized protein.
  
     0.497
CDL12_25883
CASP-like protein; Belongs to the Casparian strip membrane proteins (CASP) family.
  
     0.496
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.