STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_18552Uncharacterized protein. (725 aa)    
Predicted Functional Partners:
CDL12_20597
Uncharacterized protein.
  
     0.493
CDL12_29322
Uncharacterized protein.
  
     0.486
CDL12_11584
Uncharacterized protein.
  
     0.477
CDL12_12363
Uncharacterized protein.
  
     0.476
CDL12_08432
F-box domain-containing protein.
  
     0.474
CDL12_21679
Uncharacterized protein.
  
     0.472
CDL12_16203
Uncharacterized protein.
  
     0.463
CDL12_28545
Uncharacterized protein.
  
     0.460
CDL12_19277
VQ domain-containing protein.
  
     0.458
CDL12_01482
Uncharacterized protein.
  
     0.447
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.