STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_17909Ras-related small GTPase, Rho type. (197 aa)    
Predicted Functional Partners:
CDL12_05317
Non-specific serine/threonine protein kinase.
    
 0.952
CDL12_05318
MEKK.
    
 0.952
CDL12_07992
Uncharacterized protein.
   
 0.923
CDL12_07293
PH domain-containing protein; Belongs to the DOCK family.
   
 0.915
CDL12_15440
Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase.
    
 0.905
CDL12_19105
Plus-end-directed kinesin ATPase; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.899
CDL12_14830
Kinesin (KAR3 subfamily); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.899
CDL12_22257
Uncharacterized protein.
   
 0.878
CDL12_19547
Polygalacturonase.
   
 0.878
CDL12_29673
1-phosphatidylinositol 4-kinase; Belongs to the PI3/PI4-kinase family.
   
 0.853
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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