STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_16186Acetolactate synthase, small subunit. (420 aa)    
Predicted Functional Partners:
CDL12_12267
Thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family.
 
 0.997
CDL12_04813
Acetolactate synthase.
 
 0.997
CDL12_27185
Thiamine pyrophosphate-requiring enzyme; Belongs to the TPP enzyme family.
  
 0.994
CDL12_27950
3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.
 
 0.983
CDL12_23548
Homoserine dehydrogenase.
  
 
 0.979
CDL12_04958
Homoserine dehydrogenase.
  
 
 0.979
CDL12_07340
Serine racemase.
  
 
 0.971
CDL12_10571
Dihydroxy-acid dehydratase.
 
 0.967
CDL12_11435
Aspartate-semialdehyde dehydrogenase.
  
 
 0.966
CDL12_16925
Isocitrate dehydrogenase, gamma subunit.
  
 0.963
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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