STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_15822Cytochrome b561 domain-containing protein. (248 aa)    
Predicted Functional Partners:
CDL12_07911
Mitochondrial ribosomal protein MRP7 (L2).
   
 
 0.769
CDL12_17754
Mitochondrial/chloroplast ribosomal protein L28.
   
 
 0.766
CDL12_17290
Uncharacterized protein.
   
 
 0.753
CDL12_12994
Mitochondrial/chloroplast ribosomal protein L33-like.
   
   0.720
CDL12_08382
Putative mitochondrial ribosomal protein L23.
   
 
 0.708
CDL12_00486
Putative mitochondrial ribosomal protein L23.
   
 
 0.708
CDL12_12509
Mitochondrial/chloroplast ribosomal protein 36a.
    
   0.705
CDL12_00617
MRP-S28 domain-containing protein.
   
   0.694
CDL12_13888
Mitochondrial/chloroplast ribosomal protein L19.
   
 
 0.655
CDL12_00877
Mitochondrial/chloroplast ribosomal protein L19.
   
 
 0.655
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.