STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_14005Serine/threonine protein kinase. (668 aa)    
Predicted Functional Partners:
CDL12_18239
cGMP-dependent protein kinase.
    
  0.486
CDL12_15712
cAMP-dependent protein kinase.
    
  0.486
CDL12_15711
Serine/threonine protein phosphatase.
    
  0.486
CDL12_18345
Tyrosine-protein phosphatase domain-containing protein.
   
  0.429
CDL12_07973
Uncharacterized protein.
   
  0.429
CDL12_02840
Uncharacterized protein.
   
  0.429
CDL12_28797
PMEI domain-containing protein.
    
  0.420
CDL12_02658
DEAH-box RNA helicase.
   
  0.409
CDL12_12274
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.408
CDL12_12273
Glycerol-3-phosphate dehydrogenase (NAD(+)).
    
  0.408
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.