STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_13726Caffeate O-methyltransferase. (118 aa)    
Predicted Functional Partners:
CDL12_19861
Lysophospholipase.
   
 
 0.734
CDL12_21475
Flavonol reductase/cinnamoyl-CoA reductase.
   
 
 0.726
CDL12_10730
Cytochrome P450 CYP2 subfamily; Belongs to the cytochrome P450 family.
     
 0.710
CDL12_19440
Alcohol dehydrogenase, class V.
   
 
 0.709
CDL12_05223
Lysophospholipase.
     
 0.709
CDL12_07858
Alkyl hydroperoxide reductase, thiol specific antioxidant.
   
 
  0.660
CDL12_21355
FAD-binding PCMH-type domain-containing protein; Belongs to the oxygen-dependent FAD-linked oxidoreductase family.
     
 0.651
CDL12_06548
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
 
 0.640
CDL12_30556
Peroxidase; Belongs to the peroxidase family.
   
 
  0.638
CDL12_27302
Peroxidase; Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress.
   
 
  0.638
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.