STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_12094Pectinesterase. (192 aa)    
Predicted Functional Partners:
CDL12_12561
SANT domain-containing protein.
  
 
   0.554
CDL12_22072
AAI domain-containing protein.
  
 
  0.536
CDL12_23415
AAI domain-containing protein.
  
 
  0.535
CDL12_09281
AAI domain-containing protein.
  
 
  0.534
CDL12_07499
11-oxo-beta-amyrin 30-oxidase.
  
 
  0.526
CDL12_07006
Uncharacterized protein.
  
 
  0.519
CDL12_25552
Uncharacterized protein.
  
 
  0.513
CDL12_18772
Uncharacterized protein.
  
     0.513
CDL12_06988
Uncharacterized protein.
  
     0.513
CDL12_10938
Uncharacterized protein.
  
     0.511
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.