STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_09448Beta-amylase. (572 aa)    
Predicted Functional Partners:
CDL12_07665
4-alpha-glucanotransferase.
     
 0.915
CDL12_25145
1,4-alpha-glucan branching enzyme/starch branching enzyme II.
     
 0.905
CDL12_10893
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
     
 0.904
CDL12_10319
Alpha-amylase.
     
 0.904
CDL12_28817
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
 0.894
CDL12_23898
1,4-alpha-glucan branching enzyme/starch branching enzyme II.
     
 0.894
CDL12_29761
1,4-alpha-glucan branching enzyme/starch branching enzyme II.
     
 0.893
CDL12_27452
1,4-alpha-glucan branching enzyme/starch branching enzyme II.
     
 0.893
CDL12_25767
1,4-alpha-glucan branching enzyme/starch branching enzyme II.
     
 0.893
CDL12_10139
1,4-alpha-glucan branching enzyme/starch branching enzyme II.
     
 0.893
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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