STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_09056Uncharacterized protein. (1611 aa)    
Predicted Functional Partners:
CDL12_30101
Sulfite oxidase, molybdopterin-binding component.
   
 
 0.876
CDL12_08293
NADH-cytochrome b-5 reductase.
   
 
 0.876
CDL12_20404
Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase.
    
 0.650
CDL12_17198
Serine palmitoyltransferase.
    
 0.650
CDL12_13203
Serine palmitoyltransferase.
    
 0.650
CDL12_04245
Serine palmitoyltransferase.
    
 0.650
CDL12_05784
Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing.
    
  0.605
CDL12_24289
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.595
CDL12_14620
Naringenin-chalcone synthase; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.595
CDL12_13086
Uncharacterized protein; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
  
 0.595
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.