STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_07610ATP-grasp domain-containing protein. (526 aa)    
Predicted Functional Partners:
CDL12_30101
Sulfite oxidase, molybdopterin-binding component.
    
 0.876
CDL12_08293
NADH-cytochrome b-5 reductase.
    
 0.876
CDL12_17789
Phosphoadenosine phosphosulfate reductase.
    
  0.873
CDL12_13787
Phosphoadenosine phosphosulfate reductase.
    
  0.873
CDL12_04905
Phosphoadenosine phosphosulfate reductase.
    
  0.873
CDL12_19454
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
    
  0.632
CDL12_14931
Rubisco methyltransferase.
      
 0.603
CDL12_11476
Acyl-CoA synthetase.
   
 0.555
CDL12_11475
L-aminoadipate-semialdehyde dehydrogenase.
   
 0.555
CDL12_11682
Uncharacterized protein.
    
 0.546
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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