STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_06513Uncharacterized protein. (159 aa)    
Predicted Functional Partners:
CDL12_26463
NADH-ubiquinone oxidoreductase, NUFS7/PSST/20 kDa subunit; Belongs to the complex I 20 kDa subunit family.
    
 
 0.937
CDL12_26464
NADH-ubiquinone oxidoreductase, NDUFS3/30 kDa subunit.
    
 
 0.921
CDL12_24426
Uncharacterized protein.
   
 
 0.919
CDL12_06495
Uncharacterized protein.
   
 
 0.919
CDL12_10866
Uncharacterized protein.
   
 
 0.900
CDL12_05265
Uncharacterized protein.
   
 
 0.900
CDL12_05561
NADH:ubiquinone reductase (H(+)-translocating).
   
 
 0.898
CDL12_13152
Uncharacterized protein.
  
 
 0.885
CDL12_12885
Peptidylprolyl isomerase.
   
 
 0.884
CDL12_06882
Putative enzymes related to aldose 1-epimerase.
   
 
 0.884
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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