STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_03095Homeobox domain-containing protein. (85 aa)    
Predicted Functional Partners:
CDL12_18260
Decapping enzyme complex, predicted pyrophosphatase DCP2.
     
 0.702
CDL12_23041
Cellulose synthase (UDP-forming).
  
  
 0.659
CDL12_04260
Exosomal 3'-5' exoribonuclease complex, subunit Rrp46.
     
 0.634
CDL12_11837
Exosomal 3'-5' exoribonuclease complex subunit Rrp40.
     
 0.606
CDL12_17125
Exosomal 3'-5' exoribonuclease complex, subunit Rrp43.
     
 0.602
CDL12_07364
Uncharacterized protein.
   
 
  0.600
CDL12_16328
Exosomal 3'-5' exoribonuclease complex, subunit Rrp42.
     
 0.572
CDL12_13657
Exosomal 3'-5' exoribonuclease complex, subunit Rrp42.
     
 0.572
CDL12_14128
K-homology type RNA binding protein.
    
 0.569
CDL12_10507
K-homology type RNA binding protein.
    
 0.569
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.