STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_02877Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
CDL12_27344
Uncharacterized protein.
    
 
 0.800
CDL12_27135
Eukaryotic translation initiation factor 5A.
    
 
 0.800
CDL12_19671
Eukaryotic translation initiation factor 5A.
    
 
 0.800
CDL12_08815
Eukaryotic translation initiation factor 5A.
    
 
 0.800
CDL12_21018
Uncharacterized protein.
    
 
 0.737
CDL12_05920
EFP_N domain-containing protein.
    
 
 0.737
CDL12_03053
Nuclear transport regulator.
  
 
 
 0.623
CDL12_02280
KEKE-like motif-containing transcription regulator (Rlr1)/suppressor of sin4.
    
 
 0.550
CDL12_30082
Uncharacterized protein.
  
     0.529
CDL12_26601
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
   0.529
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.