STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_02718Protein yippee-like; Belongs to the yippee family. (107 aa)    
Predicted Functional Partners:
CDL12_13944
Uncharacterized protein.
   
 
 0.803
CDL12_10886
Putative E3 ubiquitin ligase.
    
 
 0.739
CDL12_10444
Putative E3 ubiquitin ligase.
    
 
 0.739
CDL12_26638
Proteins containing armadillo/beta-catenin-like repeat.
    
 0.670
CDL12_15034
Proteins containing armadillo/beta-catenin-like repeat.
    
 0.670
CDL12_28958
Conserved WD40 repeat-containing protein.
   
 
 0.632
CDL12_28956
WD40 repeat-containing protein.
   
 
 0.632
CDL12_09893
WD40 repeat-containing protein.
   
 
 0.632
CDL12_06935
WD40 repeat-containing protein.
   
 
 0.632
CDL12_15108
Uncharacterized protein.
   
 
 0.480
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.