STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_01699Uncharacterized protein. (148 aa)    
Predicted Functional Partners:
CDL12_30034
Uncharacterized protein.
  
     0.506
CDL12_14303
ZF-HD dimerization-type domain-containing protein.
  
     0.505
CDL12_03197
ZF-HD dimerization-type domain-containing protein.
  
     0.505
CDL12_02385
Uncharacterized protein.
  
     0.504
CDL12_11046
ZF-HD dimerization-type domain-containing protein.
  
     0.502
CDL12_12115
ZF-HD dimerization-type domain-containing protein.
  
     0.500
CDL12_07988
Uncharacterized protein.
  
     0.500
CDL12_06095
PB1 domain-containing protein.
  
     0.500
CDL12_10900
AGC-kinase C-terminal domain-containing protein.
  
     0.495
CDL12_03453
LOB domain-containing protein.
  
     0.495
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
Server load: low (14%) [HD]