STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDL12_00710Zinc_ribbon_12 domain-containing protein. (895 aa)    
Predicted Functional Partners:
CDL12_26094
Nuclear-export-signal (NES)-containing protein/polyadenylated-RNA export factor.
    
 0.765
CDL12_13825
Histone chaperone.
    
 0.712
CDL12_01848
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.668
CDL12_00598
Uncharacterized protein.
  
  
  0.650
CDL12_06187
WD40 repeat protein.
    
  0.643
CDL12_13113
C2H2-type domain-containing protein.
    
  0.641
CDL12_10060
Uncharacterized protein.
  
  
  0.638
CDL12_15682
mRNA export protein (Contains WD40 repeats).
    
  0.616
CDL12_03092
Nuclear pore complex protein NUP35.
    
  0.615
CDL12_10397
Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170).
    
  0.601
Your Current Organism:
Handroanthus impetiginosus
NCBI taxonomy Id: 429701
Other names: H. impetiginosus, Handroanthus impetiginosus (Mart. ex DC.) Mattos, Tabebuia impetiginosa, Tabebuia impetiginosa (Mart. ex DC.) Standl., Tabebuia palmeri, Tabebuia palmeri Rose
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.