Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KKB08075.1ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (326 aa)    
Predicted Functional Partners:
KKB08074.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.961
KKB08076.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.938
KKB08967.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.845
KKB10345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.843
KKB08696.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.842
KKB09135.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.842
KKB09308.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.841
KKB10276.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.840
KKB09312.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.838
KKB08948.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.811
Your Current Organism:
Devosia chinhatensis
NCBI taxonomy Id: 429727
Other names: CCM 7426, D. chinhatensis, Devosia chinhatensis Kumar et al. 2008, Devosia sp. IPL18, MTCC 8593, strain IPL18
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