STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB08116.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (617 aa)    
Predicted Functional Partners:
KKB08117.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.826
KKB08115.1
Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.779
KKB08381.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KKB08382.1
Peptide ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.773
KKB08114.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.727
KKB08383.1
Hexapeptide transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.704
KKB08118.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.630
KKB07521.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.622
KKB10243.1
alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.598
KKB08113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.509
Your Current Organism:
Devosia chinhatensis
NCBI taxonomy Id: 429727
Other names: CCM 7426, D. chinhatensis, Devosia chinhatensis Kumar et al. 2008, Devosia sp. IPL18, MTCC 8593, strain IPL18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.