STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV26620.1ABC-type bacteriocin/lantibiotic exporter, contains an N-terminal double-glycine peptidase domain. (562 aa)    
Predicted Functional Partners:
SFV35662.1
ATP-binding cassette, subfamily B.
  
 
0.811
SFV26623.1
Predicted oxidoreductase.
   
   0.789
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.732
SFV38563.1
Peptidase family M41; Belongs to the AAA ATPase family.
  
     0.612
SFV38844.1
ABC-2 type transport system ATP-binding protein.
  
  0.602
SFV38422.1
ABC-2 type transport system ATP-binding protein.
  
 
0.601
SFV26626.1
Hypothetical protein.
   
   0.570
SFV29276.1
Polar amino acid transport system ATP-binding protein.
 
    
0.524
SFV28818.1
Multiple sugar transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
0.521
SFV37369.1
Ribose transport system ATP-binding protein.
   
 
0.521
Your Current Organism:
Devosia crocina
NCBI taxonomy Id: 429728
Other names: CCM 7425, D. crocina, Devosia crocina Verma et al. 2009, Devosia sp. IPL20, MTCC 8590, strain IPL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.