STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV27817.1Sugar phosphate isomerase/epimerase. (267 aa)    
Predicted Functional Partners:
SFV27801.1
Multiple sugar transport system substrate-binding protein.
 
    0.845
SFV28412.1
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Belongs to the TPP enzyme family.
  
 
 0.680
SFV37748.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
    
  0.655
SFV27809.1
Multiple sugar transport system permease protein.
 
    0.626
SFV27805.1
Multiple sugar transport system permease protein.
 
    0.583
SFV27821.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.575
xylB
Xylulokinase.
  
 
 0.569
SFV27813.1
Sugar phosphate isomerase/epimerase.
 
    
0.563
SFV28409.1
5-dehydro-2-deoxygluconokinase.
  
 
 0.561
SFV28416.1
5-deoxy-glucuronate isomerase.
  
  
 0.485
Your Current Organism:
Devosia crocina
NCBI taxonomy Id: 429728
Other names: CCM 7425, D. crocina, Devosia crocina Verma et al. 2009, Devosia sp. IPL20, MTCC 8590, strain IPL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.