STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV28019.1Response regulator receiver domain-containing protein. (117 aa)    
Predicted Functional Partners:
SFV28015.1
Hypothetical protein.
       0.773
SFV28006.1
Exodeoxyribonuclease-3.
       0.566
SFV28010.1
Hypothetical protein.
       0.566
SFV28963.1
Bacteriophytochrome (light-regulated signal transduction histidine kinase).
     
 0.489
SFV28023.1
Sulfate transport system substrate-binding protein.
       0.478
SFV30194.1
PAS domain S-box-containing protein.
     
 0.418
Your Current Organism:
Devosia crocina
NCBI taxonomy Id: 429728
Other names: CCM 7425, D. crocina, Devosia crocina Verma et al. 2009, Devosia sp. IPL20, MTCC 8590, strain IPL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.