STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV30908.1Predicted arabinose efflux permease, MFS family. (405 aa)    
Predicted Functional Partners:
SFV30912.1
Quinol monooxygenase YgiN.
       0.527
SFV26647.1
Long-chain acyl-CoA synthetase.
 
   
  0.498
SFV30905.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
       0.497
SFV28175.1
Hypothetical protein.
  
     0.426
SFV26736.1
HlyD family secretion protein.
  
   0.424
SFV37748.1
Para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase.
  
 
 0.410
Your Current Organism:
Devosia crocina
NCBI taxonomy Id: 429728
Other names: CCM 7425, D. crocina, Devosia crocina Verma et al. 2009, Devosia sp. IPL20, MTCC 8590, strain IPL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.