STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV31570.1Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (341 aa)    
Predicted Functional Partners:
SFV36550.1
Glucuronate isomerase.
 
  
 0.898
SFV38312.1
2-dehydro-3-deoxygluconokinase.
 
  
 0.801
SFV38311.1
Fructuronate reductase; Belongs to the mannitol dehydrogenase family.
 
 
 0.642
SFV31573.1
5-dehydro-4-deoxyglucarate dehydratase; Belongs to the DapA family.
    
  0.636
SFV26508.1
Altronate hydrolase.
 
 
 0.626
SFV36656.1
Mannitol 2-dehydrogenase.
 
 
 0.597
SFV28493.1
Galactonate dehydratase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
  
 0.590
kduI
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
 
  
 0.576
SFV31567.1
Beta-glucosidase.
       0.533
SFV29125.1
Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.448
Your Current Organism:
Devosia crocina
NCBI taxonomy Id: 429728
Other names: CCM 7425, D. crocina, Devosia crocina Verma et al. 2009, Devosia sp. IPL20, MTCC 8590, strain IPL20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.