STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFV36921.1Diguanylate cyclase (GGDEF) domain-containing protein. (737 aa)    
Predicted Functional Partners:
SFV38763.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
 
0.959
SFV30194.1
PAS domain S-box-containing protein.
  
 0.958
SFV35915.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.957
SFV29250.1
Response regulator receiver domain-containing protein.
  
 0.955
SFV38576.1
Signal transduction histidine kinase.
 
 
 0.952
SFV30845.1
Two-component system, cell cycle sensor histidine kinase and response regulator CckA.
  
 0.940
SFV32341.1
PAS domain S-box-containing protein.
 
 0.940
SFV32216.1
PAS domain S-box-containing protein.
  
 0.936
SFV36105.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.933
SFV38273.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
 
0.931
Your Current Organism:
Devosia crocina
NCBI taxonomy Id: 429728
Other names: CCM 7425, D. crocina, Devosia crocina Verma et al. 2009, Devosia sp. IPL20, MTCC 8590, strain IPL20
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