A0A182JSJ4 protein (Anopheles christyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A182JSJ4

SET domain-containing protein. (393 aa)

Predicted Functional Partners:

A0A182JXV1

0.841

A0A182JWV8

0.837

A0A182JT56

0.735

A0A182K2G0

0.735

A0A182K039

0.704

A0A182JWL1

0.662

A0A182K6G6

0.625

A0A182JPK7

0.605

A0A182JYD4

0.600

A0A182JQS2

0.599

Your Current Organism:

Anopheles christyi

NCBI taxonomy Id: 43041
Other names: A. christyi

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182JPK7	A0A182JQS2	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A182JPK7	A0A182JSJ4	Uncharacterized protein.	SET domain-containing protein.	0.605
A0A182JPK7	A0A182JT56	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.584
A0A182JPK7	A0A182JWL1	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.479
A0A182JPK7	A0A182JWV8	Uncharacterized protein.	MYND-type domain-containing protein.	0.455
A0A182JPK7	A0A182JXV1	Uncharacterized protein.	Uncharacterized protein.	0.740
A0A182JPK7	A0A182K039	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.704
A0A182JPK7	A0A182K6G6	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.599
A0A182JQS2	A0A182JPK7	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A182JQS2	A0A182JSJ4	Uncharacterized protein.	SET domain-containing protein.	0.599
A0A182JQS2	A0A182JT56	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.874
A0A182JQS2	A0A182JWL1	Uncharacterized protein.	Histone-lysine N-methyltransferase.	0.890
A0A182JQS2	A0A182JWV8	Uncharacterized protein.	MYND-type domain-containing protein.	0.582
A0A182JQS2	A0A182JXV1	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A182JQS2	A0A182K039	Uncharacterized protein.	TPR_REGION domain-containing protein.	0.975
A0A182JQS2	A0A182K6G6	Uncharacterized protein.	Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.	0.977
A0A182JSJ4	A0A182JPK7	SET domain-containing protein.	Uncharacterized protein.	0.605
A0A182JSJ4	A0A182JQS2	SET domain-containing protein.	Uncharacterized protein.	0.599
A0A182JSJ4	A0A182JT56	SET domain-containing protein.	Histone-lysine N-methyltransferase.	0.735
A0A182JSJ4	A0A182JWL1	SET domain-containing protein.	Histone-lysine N-methyltransferase.	0.662