A0A182JSZ3 protein (Anopheles christyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A182JSZ3

Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family. (724 aa)

Predicted Functional Partners:

A0A182JSW0

0.660

A0A182KG39

0.599

A0A182K4Q8

0.466

A0A182KEX6

0.466

A0A182KG52

0.466

A0A182KHL9

0.466

A0A182KIK8

0.466

A0A182K5K2

0.437

A0A182KFU9

0.427

A0A182KC94

0.406

Your Current Organism:

Anopheles christyi

NCBI taxonomy Id: 43041
Other names: A. christyi

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182JSW0	A0A182JSZ3	USP domain-containing protein; Belongs to the peptidase C19 family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.660
A0A182JSW0	A0A182KG39	USP domain-containing protein; Belongs to the peptidase C19 family.	Fes1 domain-containing protein.	0.867
A0A182JSZ3	A0A182JSW0	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	USP domain-containing protein; Belongs to the peptidase C19 family.	0.660
A0A182JSZ3	A0A182K4Q8	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.466
A0A182JSZ3	A0A182K5K2	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein.	0.437
A0A182JSZ3	A0A182KC94	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Methyltransf_FA domain-containing protein.	0.406
A0A182JSZ3	A0A182KEX6	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.466
A0A182JSZ3	A0A182KFU9	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.427
A0A182JSZ3	A0A182KG39	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Fes1 domain-containing protein.	0.599
A0A182JSZ3	A0A182KG52	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.466
A0A182JSZ3	A0A182KHL9	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.466
A0A182JSZ3	A0A182KIK8	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.466
A0A182K4Q8	A0A182JSZ3	Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.466
A0A182K4Q8	A0A182KC94	Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Methyltransf_FA domain-containing protein.	0.466
A0A182K4Q8	A0A182KEX6	Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.888
A0A182K4Q8	A0A182KFU9	Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.500
A0A182K4Q8	A0A182KHL9	Neur_chan_memb domain-containing protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	Neur_chan_LBD domain-containing protein.	0.530
A0A182K5K2	A0A182JSZ3	Uncharacterized protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.437
A0A182K5K2	A0A182KC94	Uncharacterized protein.	Methyltransf_FA domain-containing protein.	0.437
A0A182KC94	A0A182JSZ3	Methyltransf_FA domain-containing protein.	Uncharacterized protein; Belongs to the ligand-gated ion channel (TC 1.A.9) family.	0.406