A0A182JVC3 protein (Anopheles christyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182JVC3

Vacuolar protein sorting 20. (214 aa)

Predicted Functional Partners:

A0A182JXF7

0.998

A0A182JQA4

0.994

A0A182JYM4

0.989

A0A182K893

0.989

A0A182K523

0.984

A0A182KFS0

0.981

A0A182K8Y8

0.935

A0A182JSY6

0.934

A0A182K587

0.913

A0A182JNM1

0.900

Your Current Organism:

Anopheles christyi

NCBI taxonomy Id: 43041
Other names: A. christyi

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182JNM1	A0A182JQA4	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A182JNM1	A0A182JSY6	Uncharacterized protein.	Uncharacterized protein.	0.509
A0A182JNM1	A0A182JVC3	Uncharacterized protein.	Vacuolar protein sorting 20.	0.900
A0A182JNM1	A0A182JXF7	Uncharacterized protein.	Uncharacterized protein.	0.909
A0A182JNM1	A0A182JYM4	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.918
A0A182JNM1	A0A182K523	Uncharacterized protein.	Uncharacterized protein.	0.886
A0A182JNM1	A0A182K587	Uncharacterized protein.	Uncharacterized protein.	0.660
A0A182JNM1	A0A182K893	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.976
A0A182JNM1	A0A182K8Y8	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.999
A0A182JNM1	A0A182KFS0	Uncharacterized protein.	Uncharacterized protein.	0.883
A0A182JQA4	A0A182JNM1	Uncharacterized protein.	Uncharacterized protein.	0.893
A0A182JQA4	A0A182JSY6	Uncharacterized protein.	Uncharacterized protein.	0.979
A0A182JQA4	A0A182JVC3	Uncharacterized protein.	Vacuolar protein sorting 20.	0.994
A0A182JQA4	A0A182JXF7	Uncharacterized protein.	Uncharacterized protein.	0.941
A0A182JQA4	A0A182JYM4	Uncharacterized protein.	Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.	0.964
A0A182JQA4	A0A182K523	Uncharacterized protein.	Uncharacterized protein.	0.995
A0A182JQA4	A0A182K587	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A182JQA4	A0A182K893	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.941
A0A182JQA4	A0A182K8Y8	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.875
A0A182JQA4	A0A182KFS0	Uncharacterized protein.	Uncharacterized protein.	0.997