Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182JNX0 | A0A182JPV0 | Uncharacterized protein. | Uncharacterized protein. | 0.403 |
A0A182JNX0 | A0A182JRR5 | Uncharacterized protein. | Uncharacterized protein; Belongs to the phosphohexose mutase family. | 0.595 |
A0A182JNX0 | A0A182JS64 | Uncharacterized protein. | 2-oxoisovalerate dehydrogenase subunit alpha; The branched-chain alpha-keto dehydrogenase complex catalyzes the overall conversion of alpha-keto acids to acyl-CoA and CO(2). It contains multiple copies of three enzymatic components: branched-chain alpha-keto acid decarboxylase (E1), lipoamide acyltransferase (E2) and lipoamide dehydrogenase (E3). | 0.825 |
A0A182JNX0 | A0A182JW83 | Uncharacterized protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.980 |
A0A182JNX0 | A0A182JWF2 | Uncharacterized protein. | Uncharacterized protein. | 0.870 |
A0A182JNX0 | A0A182JXY8 | Uncharacterized protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.798 |
A0A182JNX0 | A0A182JYQ6 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.738 |
A0A182JNX0 | A0A182K618 | Uncharacterized protein. | Uncharacterized protein. | 0.711 |
A0A182JNX0 | A0A182K6K2 | Uncharacterized protein. | 6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH. | 0.711 |
A0A182JPV0 | A0A182JNX0 | Uncharacterized protein. | Uncharacterized protein. | 0.403 |
A0A182JPV0 | A0A182JRR5 | Uncharacterized protein. | Uncharacterized protein; Belongs to the phosphohexose mutase family. | 0.984 |
A0A182JPV0 | A0A182JVK6 | Uncharacterized protein. | Pribosyltran_N domain-containing protein. | 0.973 |
A0A182JPV0 | A0A182JW83 | Uncharacterized protein. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.808 |
A0A182JPV0 | A0A182JWF2 | Uncharacterized protein. | Uncharacterized protein. | 0.962 |
A0A182JPV0 | A0A182JXY8 | Uncharacterized protein. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway. | 0.947 |
A0A182JPV0 | A0A182JYQ6 | Uncharacterized protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.951 |
A0A182JRR5 | A0A182JNX0 | Uncharacterized protein; Belongs to the phosphohexose mutase family. | Uncharacterized protein. | 0.595 |
A0A182JRR5 | A0A182JPV0 | Uncharacterized protein; Belongs to the phosphohexose mutase family. | Uncharacterized protein. | 0.984 |
A0A182JRR5 | A0A182JVK6 | Uncharacterized protein; Belongs to the phosphohexose mutase family. | Pribosyltran_N domain-containing protein. | 0.945 |
A0A182JRR5 | A0A182JW83 | Uncharacterized protein; Belongs to the phosphohexose mutase family. | Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family. | 0.584 |
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