Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
A0A182JPQ9 | A0A182JU10 | Uncharacterized protein. | Uncharacterized protein. | 0.756 |
A0A182JPQ9 | A0A182JZL5 | Uncharacterized protein. | Uncharacterized protein. | 0.686 |
A0A182JPQ9 | A0A182K005 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.822 |
A0A182JPQ9 | A0A182K124 | Uncharacterized protein. | Uncharacterized protein. | 0.873 |
A0A182JPQ9 | A0A182K870 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.939 |
A0A182JPQ9 | A0A182KCX8 | Uncharacterized protein. | Uncharacterized protein. | 0.561 |
A0A182JPQ9 | A0A182KG93 | Uncharacterized protein. | Uncharacterized protein. | 0.835 |
A0A182JTI7 | A0A182JU10 | Uncharacterized protein. | Uncharacterized protein. | 0.646 |
A0A182JTI7 | A0A182JZL5 | Uncharacterized protein. | Uncharacterized protein. | 0.572 |
A0A182JTI7 | A0A182K005 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.722 |
A0A182JTI7 | A0A182K124 | Uncharacterized protein. | Uncharacterized protein. | 0.801 |
A0A182JTI7 | A0A182K870 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.803 |
A0A182JTI7 | A0A182KCX8 | Uncharacterized protein. | Uncharacterized protein. | 0.580 |
A0A182JTI7 | A0A182KG93 | Uncharacterized protein. | Uncharacterized protein. | 0.748 |
A0A182JU10 | A0A182JPQ9 | Uncharacterized protein. | Uncharacterized protein. | 0.756 |
A0A182JU10 | A0A182JTI7 | Uncharacterized protein. | Uncharacterized protein. | 0.646 |
A0A182JU10 | A0A182JZL5 | Uncharacterized protein. | Uncharacterized protein. | 0.754 |
A0A182JU10 | A0A182JZW8 | Uncharacterized protein. | Uncharacterized protein. | 0.673 |
A0A182JU10 | A0A182K005 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component A; Substrate-binding subunit (component A) of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins and presents the substrate peptide to the catalytic component B. The component A is thought to be regenerated by transferring its prenylated Rab back to the donor membrane. | 0.753 |
A0A182JU10 | A0A182K124 | Uncharacterized protein. | Uncharacterized protein. | 0.749 |
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