A0A182K279 protein (Anopheles christyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A182K279

Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs. (918 aa)

Predicted Functional Partners:

A0A182JNY0

0.931

A0A182K148

0.929

A0A182JZS1

0.926

A0A182K0Z2

0.892

A0A182KGZ6

0.841

A0A182K6Y1

0.836

A0A182JQQ8

0.833

A0A182KB76

0.790

A0A182JWZ7

0.774

A0A182JTQ4

0.756

Your Current Organism:

Anopheles christyi

NCBI taxonomy Id: 43041
Other names: A. christyi

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182JNY0	A0A182K148	Uncharacterized protein.	40S ribosomal protein S9.	0.438
A0A182JNY0	A0A182K279	Uncharacterized protein.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.931
A0A182JQQ8	A0A182JTQ4	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.585
A0A182JQQ8	A0A182JWZ7	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	0.603
A0A182JQQ8	A0A182JZS1	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A182JQQ8	A0A182K0Z2	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	40S ribosomal protein S20.	0.999
A0A182JQQ8	A0A182K148	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	40S ribosomal protein S9.	0.999
A0A182JQQ8	A0A182K279	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.833
A0A182JQQ8	A0A182K6Y1	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	HABP4_PAI-RBP1 domain-containing protein.	0.988
A0A182JQQ8	A0A182KB76	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	Uncharacterized protein.	0.752
A0A182JTQ4	A0A182JQQ8	Uncharacterized protein.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.585
A0A182JTQ4	A0A182JZS1	Uncharacterized protein.	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.	0.586
A0A182JTQ4	A0A182K0Z2	Uncharacterized protein.	40S ribosomal protein S20.	0.555
A0A182JTQ4	A0A182K148	Uncharacterized protein.	40S ribosomal protein S9.	0.565
A0A182JTQ4	A0A182K279	Uncharacterized protein.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.756
A0A182JTQ4	A0A182K6Y1	Uncharacterized protein.	HABP4_PAI-RBP1 domain-containing protein.	0.464
A0A182JWZ7	A0A182JQQ8	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.	0.603
A0A182JWZ7	A0A182K0Z2	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	40S ribosomal protein S20.	0.426
A0A182JWZ7	A0A182K148	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	40S ribosomal protein S9.	0.433
A0A182JWZ7	A0A182K279	Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.	Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.	0.774