A0A182K445 protein (Anopheles christyi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A182K445

ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (812 aa)

Predicted Functional Partners:

A0A182JV45

0.995

A0A182KD43

0.994

A0A182KIA2

0.992

A0A182JUX6

0.991

A0A182K682

0.991

A0A182KD56

0.991

A0A182JNN4

0.988

A0A182K3Y9

0.988

A0A182JRA9

0.987

A0A182K1D0

0.987

Your Current Organism:

Anopheles christyi

NCBI taxonomy Id: 43041
Other names: A. christyi

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182JNN4	A0A182JRA9	Uncharacterized protein.	Uncharacterized protein.	0.844
A0A182JNN4	A0A182JUX6	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.764
A0A182JNN4	A0A182JV45	Uncharacterized protein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.875
A0A182JNN4	A0A182K1D0	Uncharacterized protein.	Uncharacterized protein.	0.604
A0A182JNN4	A0A182K3Y9	Uncharacterized protein.	Uncharacterized protein.	0.926
A0A182JNN4	A0A182K445	Uncharacterized protein.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.	0.988
A0A182JNN4	A0A182K682	Uncharacterized protein.	Uncharacterized protein.	0.934
A0A182JNN4	A0A182KD43	Uncharacterized protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.660
A0A182JNN4	A0A182KD56	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.638
A0A182JNN4	A0A182KIA2	Uncharacterized protein.	CP-type G domain-containing protein.	0.699
A0A182JRA9	A0A182JNN4	Uncharacterized protein.	Uncharacterized protein.	0.844
A0A182JRA9	A0A182JUX6	Uncharacterized protein.	Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.	0.989
A0A182JRA9	A0A182JV45	Uncharacterized protein.	Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.	0.921
A0A182JRA9	A0A182K1D0	Uncharacterized protein.	Uncharacterized protein.	0.987
A0A182JRA9	A0A182K3Y9	Uncharacterized protein.	Uncharacterized protein.	0.994
A0A182JRA9	A0A182K445	Uncharacterized protein.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.	0.987
A0A182JRA9	A0A182K682	Uncharacterized protein.	Uncharacterized protein.	0.992
A0A182JRA9	A0A182KD43	Uncharacterized protein.	Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.	0.991
A0A182JRA9	A0A182KD56	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.991
A0A182JRA9	A0A182KIA2	Uncharacterized protein.	CP-type G domain-containing protein.	0.988