STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES67523.1AMP-binding enzyme. (555 aa)    
Predicted Functional Partners:
SET47579.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
  
 
0.959
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.806
SET75281.1
AMP-binding enzyme C-terminal domain-containing protein.
 
  
 
0.693
SET08074.1
Long-chain acyl-CoA synthetase (AMP-forming).
 
  
0.657
SET24611.1
Long-chain acyl-CoA synthetase.
  
  
 
0.652
rplE
Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
    
 
 0.628
SES90878.1
fatty-acyl-CoA synthase.
 
 
0.625
SET40571.1
Long-chain acyl-CoA synthetase.
  
  
 
0.613
SET87029.1
Long-chain acyl-CoA synthetase.
  
  
 
0.607
SET20250.1
Ankyrin repeat-containing protein.
   
  0.605
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.