Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES66649.1 | SES78642.1 | SAMN04487962_10187 | SAMN04487962_101541 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | acetyl-CoA synthetase. | 0.989 |
SES66649.1 | SES84456.1 | SAMN04487962_10187 | SAMN04487962_10223 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.611 |
SES66649.1 | SES89805.1 | SAMN04487962_10187 | SAMN04487962_102234 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.963 |
SES66649.1 | SET01680.1 | SAMN04487962_10187 | SAMN04487962_103228 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Acylphosphatase. | 0.934 |
SES66649.1 | SET56777.1 | SAMN04487962_10187 | SAMN04487962_11290 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Isocitrate lyase. | 0.952 |
SES66649.1 | SET61751.1 | SAMN04487962_10187 | SAMN04487962_11454 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.833 |
SES66649.1 | SET67606.1 | SAMN04487962_10187 | SAMN04487962_11662 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | propionyl-CoA synthetase. | 0.970 |
SES66649.1 | ackA | SAMN04487962_10187 | SAMN04487962_10186 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.999 |
SES66649.1 | acsA | SAMN04487962_10187 | SAMN04487962_11141 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.984 |
SES66649.1 | glcB | SAMN04487962_10187 | SAMN04487962_101350 | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.993 |
SES78642.1 | SES66649.1 | SAMN04487962_101541 | SAMN04487962_10187 | acetyl-CoA synthetase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.989 |
SES78642.1 | SES84456.1 | SAMN04487962_101541 | SAMN04487962_10223 | acetyl-CoA synthetase. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.976 |
SES78642.1 | SES89805.1 | SAMN04487962_101541 | SAMN04487962_102234 | acetyl-CoA synthetase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.976 |
SES78642.1 | SET56777.1 | SAMN04487962_101541 | SAMN04487962_11290 | acetyl-CoA synthetase. | Isocitrate lyase. | 0.574 |
SES78642.1 | SET61751.1 | SAMN04487962_101541 | SAMN04487962_11454 | acetyl-CoA synthetase. | Coniferyl-aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.659 |
SES78642.1 | SET67606.1 | SAMN04487962_101541 | SAMN04487962_11662 | acetyl-CoA synthetase. | propionyl-CoA synthetase. | 0.973 |
SES78642.1 | ackA | SAMN04487962_101541 | SAMN04487962_10186 | acetyl-CoA synthetase. | Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. | 0.986 |
SES78642.1 | acsA | SAMN04487962_101541 | SAMN04487962_11141 | acetyl-CoA synthetase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.969 |
SES78642.1 | glcB | SAMN04487962_101541 | SAMN04487962_101350 | acetyl-CoA synthetase. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.985 |
SES84456.1 | SES66649.1 | SAMN04487962_10223 | SAMN04487962_10187 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.611 |
page 1 of 5