STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SES88501.1Putative intracellular protease/amidase. (226 aa)    
Predicted Functional Partners:
SES68059.1
Acetoin utilization deacetylase AcuC.
    
  0.762
SET58058.1
Acetoin utilization deacetylase AcuC.
    
  0.762
SET80763.1
Acetoin utilization deacetylase AcuC.
    
  0.762
SES84906.1
ATP-binding cassette, subfamily B.
  
  0.750
SET31844.1
ATP-binding cassette, subfamily B.
  
  0.750
SET58335.1
ATP-binding cassette, subfamily C.
  
  0.750
msbA
ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
  0.750
SET77626.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
    
 0.738
rpsJ
SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
   
   0.732
SET18161.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.703
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.