Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES97608.1 | SES97698.1 | SAMN04487962_103101 | SAMN04487962_103103 | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | Hypothetical protein. | 0.505 |
SES97608.1 | SES97738.1 | SAMN04487962_103101 | SAMN04487962_103104 | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.456 |
SES97608.1 | SES97772.1 | SAMN04487962_103101 | SAMN04487962_103105 | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | Hypothetical protein. | 0.456 |
SES97608.1 | coaE | SAMN04487962_103101 | SAMN04487962_103102 | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.543 |
SES97698.1 | SES97608.1 | SAMN04487962_103103 | SAMN04487962_103101 | Hypothetical protein. | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | 0.505 |
SES97698.1 | SES97738.1 | SAMN04487962_103103 | SAMN04487962_103104 | Hypothetical protein. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.713 |
SES97698.1 | SES97772.1 | SAMN04487962_103103 | SAMN04487962_103105 | Hypothetical protein. | Hypothetical protein. | 0.573 |
SES97698.1 | coaE | SAMN04487962_103103 | SAMN04487962_103102 | Hypothetical protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.788 |
SES97738.1 | SES97608.1 | SAMN04487962_103104 | SAMN04487962_103101 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | 0.456 |
SES97738.1 | SES97698.1 | SAMN04487962_103104 | SAMN04487962_103103 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Hypothetical protein. | 0.713 |
SES97738.1 | SES97772.1 | SAMN04487962_103104 | SAMN04487962_103105 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Hypothetical protein. | 0.639 |
SES97738.1 | SET17386.1 | SAMN04487962_103104 | SAMN04487962_10596 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.449 |
SES97738.1 | coaE | SAMN04487962_103104 | SAMN04487962_103102 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.713 |
SES97738.1 | thyA | SAMN04487962_103104 | SAMN04487962_11531 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis. | 0.450 |
SES97738.1 | tmk | SAMN04487962_103104 | SAMN04487962_101366 | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family. | 0.461 |
SES97772.1 | SES97608.1 | SAMN04487962_103105 | SAMN04487962_103101 | Hypothetical protein. | Tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase. | 0.456 |
SES97772.1 | SES97698.1 | SAMN04487962_103105 | SAMN04487962_103103 | Hypothetical protein. | Hypothetical protein. | 0.573 |
SES97772.1 | SES97738.1 | SAMN04487962_103105 | SAMN04487962_103104 | Hypothetical protein. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.639 |
SES97772.1 | coaE | SAMN04487962_103105 | SAMN04487962_103102 | Hypothetical protein. | dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family. | 0.579 |
SET17386.1 | SES97738.1 | SAMN04487962_10596 | SAMN04487962_103104 | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA. | 0.449 |
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