Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES69272.1 | SET51355.1 | SAMN04487962_101204 | SAMN04487962_11175 | Aspartate aminotransferase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.950 |
SES69272.1 | argA | SAMN04487962_101204 | SAMN04487962_11440 | Aspartate aminotransferase. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.955 |
SES69272.1 | argG | SAMN04487962_101204 | SAMN04487962_104174 | Aspartate aminotransferase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.962 |
SES69272.1 | argH | SAMN04487962_101204 | SAMN04487962_11269 | Aspartate aminotransferase. | Argininosuccinate lyase. | 0.408 |
SES69272.1 | purA | SAMN04487962_101204 | SAMN04487962_103173 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.952 |
SET00979.1 | SET61453.1 | SAMN04487962_103208 | SAMN04487962_11441 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine deacetylase. | 0.988 |
SET00979.1 | SET81663.1 | SAMN04487962_103208 | SAMN04487962_1278 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.969 |
SET00979.1 | argA | SAMN04487962_103208 | SAMN04487962_11440 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.954 |
SET00979.1 | argG | SAMN04487962_103208 | SAMN04487962_104174 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.997 |
SET00979.1 | argH | SAMN04487962_103208 | SAMN04487962_11269 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate lyase. | 0.907 |
SET00979.1 | carA | SAMN04487962_103208 | SAMN04487962_12212 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.997 |
SET00979.1 | carB | SAMN04487962_103208 | SAMN04487962_12213 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.997 |
SET51355.1 | SES69272.1 | SAMN04487962_11175 | SAMN04487962_101204 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aspartate aminotransferase. | 0.950 |
SET51355.1 | argG | SAMN04487962_11175 | SAMN04487962_104174 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.956 |
SET51355.1 | argH | SAMN04487962_11175 | SAMN04487962_11269 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Argininosuccinate lyase. | 0.524 |
SET51355.1 | purA | SAMN04487962_11175 | SAMN04487962_103173 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.957 |
SET61453.1 | SET00979.1 | SAMN04487962_11441 | SAMN04487962_103208 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.988 |
SET61453.1 | SET81663.1 | SAMN04487962_11441 | SAMN04487962_1278 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.977 |
SET61453.1 | argA | SAMN04487962_11441 | SAMN04487962_11440 | Acetylornithine deacetylase. | N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily. | 0.982 |
SET61453.1 | argG | SAMN04487962_11441 | SAMN04487962_104174 | Acetylornithine deacetylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.993 |
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