STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET20752.1Probable FeS assembly SUF system protein SufT. (180 aa)    
Predicted Functional Partners:
SET20623.1
Fe-S cluster assembly ATP-binding protein.
 
  
 0.888
SET20648.1
Fe-S cluster assembly protein SufD.
 
   
 0.872
SET20672.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.845
SET20592.1
Iron-regulated ABC transporter membrane component SufB.
 
   
 0.836
SET65450.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.826
SET65394.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
  
 
 0.816
SET20796.1
Cysteine desulfuration protein SufE.
 
     0.716
SET65379.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
  
 
 0.638
SET65412.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
  
 
 0.638
SES86002.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
 0.506
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.