Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SES69501.1 | SET01805.1 | SAMN04487962_101214 | SAMN04487962_103233 | Chorismate mutase. | Sugar phosphate permease. | 0.532 |
SES69501.1 | SET26206.1 | SAMN04487962_101214 | SAMN04487962_106106 | Chorismate mutase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.529 |
SES69501.1 | SET33856.1 | SAMN04487962_101214 | SAMN04487962_107168 | Chorismate mutase. | Sugar phosphate permease. | 0.486 |
SES69501.1 | SET71354.1 | SAMN04487962_101214 | SAMN04487962_1197 | Chorismate mutase. | Cyanate permease. | 0.532 |
SES89976.1 | SET01805.1 | SAMN04487962_102239 | SAMN04487962_103233 | Transcriptional regulator, IclR family. | Sugar phosphate permease. | 0.541 |
SES89976.1 | SET33856.1 | SAMN04487962_102239 | SAMN04487962_107168 | Transcriptional regulator, IclR family. | Sugar phosphate permease. | 0.412 |
SES89976.1 | SET71354.1 | SAMN04487962_102239 | SAMN04487962_1197 | Transcriptional regulator, IclR family. | Cyanate permease. | 0.537 |
SET01805.1 | SES69501.1 | SAMN04487962_103233 | SAMN04487962_101214 | Sugar phosphate permease. | Chorismate mutase. | 0.532 |
SET01805.1 | SES89976.1 | SAMN04487962_103233 | SAMN04487962_102239 | Sugar phosphate permease. | Transcriptional regulator, IclR family. | 0.541 |
SET01805.1 | SET33856.1 | SAMN04487962_103233 | SAMN04487962_107168 | Sugar phosphate permease. | Sugar phosphate permease. | 0.596 |
SET26206.1 | SES69501.1 | SAMN04487962_106106 | SAMN04487962_101214 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Chorismate mutase. | 0.529 |
SET26206.1 | SET33856.1 | SAMN04487962_106106 | SAMN04487962_107168 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Sugar phosphate permease. | 0.461 |
SET33856.1 | SES69501.1 | SAMN04487962_107168 | SAMN04487962_101214 | Sugar phosphate permease. | Chorismate mutase. | 0.486 |
SET33856.1 | SES89976.1 | SAMN04487962_107168 | SAMN04487962_102239 | Sugar phosphate permease. | Transcriptional regulator, IclR family. | 0.412 |
SET33856.1 | SET01805.1 | SAMN04487962_107168 | SAMN04487962_103233 | Sugar phosphate permease. | Sugar phosphate permease. | 0.596 |
SET33856.1 | SET26206.1 | SAMN04487962_107168 | SAMN04487962_106106 | Sugar phosphate permease. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.461 |
SET33856.1 | SET42419.1 | SAMN04487962_107168 | SAMN04487962_10995 | Sugar phosphate permease. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.465 |
SET33856.1 | SET71354.1 | SAMN04487962_107168 | SAMN04487962_1197 | Sugar phosphate permease. | Cyanate permease. | 0.613 |
SET42419.1 | SET33856.1 | SAMN04487962_10995 | SAMN04487962_107168 | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | Sugar phosphate permease. | 0.465 |
SET71354.1 | SES69501.1 | SAMN04487962_1197 | SAMN04487962_101214 | Cyanate permease. | Chorismate mutase. | 0.532 |
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