Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SET47050.1 | SET47080.1 | SAMN04487962_11073 | SAMN04487962_11074 | DNA-binding transcriptional regulator, MerR family. | Cu+-exporting ATPase. | 0.828 |
SET47050.1 | SET47109.1 | SAMN04487962_11073 | SAMN04487962_11075 | DNA-binding transcriptional regulator, MerR family. | Uncharacterized conserved protein. | 0.527 |
SET47050.1 | SET47146.1 | SAMN04487962_11073 | SAMN04487962_11076 | DNA-binding transcriptional regulator, MerR family. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.430 |
SET47080.1 | SET47050.1 | SAMN04487962_11074 | SAMN04487962_11073 | Cu+-exporting ATPase. | DNA-binding transcriptional regulator, MerR family. | 0.828 |
SET47080.1 | SET47109.1 | SAMN04487962_11074 | SAMN04487962_11075 | Cu+-exporting ATPase. | Uncharacterized conserved protein. | 0.611 |
SET47109.1 | SET47050.1 | SAMN04487962_11075 | SAMN04487962_11073 | Uncharacterized conserved protein. | DNA-binding transcriptional regulator, MerR family. | 0.527 |
SET47109.1 | SET47080.1 | SAMN04487962_11075 | SAMN04487962_11074 | Uncharacterized conserved protein. | Cu+-exporting ATPase. | 0.611 |
SET47109.1 | SET47146.1 | SAMN04487962_11075 | SAMN04487962_11076 | Uncharacterized conserved protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.466 |
SET47146.1 | SET47050.1 | SAMN04487962_11076 | SAMN04487962_11073 | Diguanylate cyclase (GGDEF) domain-containing protein. | DNA-binding transcriptional regulator, MerR family. | 0.430 |
SET47146.1 | SET47109.1 | SAMN04487962_11076 | SAMN04487962_11075 | Diguanylate cyclase (GGDEF) domain-containing protein. | Uncharacterized conserved protein. | 0.466 |