STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
SET60996.1Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (229 aa)    
Predicted Functional Partners:
SES73806.1
Phosphoglycolate phosphatase.
  
  
 
0.972
SET17731.1
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
  0.971
SET82594.1
Glycolate oxidase.
    
 0.966
SET82609.1
Glycolate oxidase FAD binding subunit.
    
 0.966
SET82628.1
Glycolate oxidase iron-sulfur subunit.
    
 0.965
SET60959.1
Ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
  
 0.911
SET50319.1
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.793
SET60856.1
Hypothetical protein.
 
  
 0.643
moaA
Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.628
SET60926.1
Protein of unknown function.
       0.608
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.