STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET65467.1oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. (680 aa)    
Predicted Functional Partners:
SET65326.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 0.993
SET65450.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
 0.992
SET65433.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
  
 0.963
SET65379.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
  
 0.962
SET18161.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.954
SET65412.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
  
 0.949
SET33684.1
Urea carboxylase.
  
 0.939
SET65394.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
  
 0.936
SES66649.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.916
SES89947.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.887
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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