STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET71760.1Two-component system, NtrC family, sensor histidine kinase AtoS. (588 aa)    
Predicted Functional Partners:
SET07193.1
PAS domain S-box-containing protein.
 
0.974
SET71734.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
 0.952
SET50992.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.948
pdhA
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
   
 0.881
SET62438.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
  
 0.872
SET17001.1
Two-component system, OmpR family, response regulator CpxR.
 
 0.865
SET90463.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 0.854
SET46580.1
Twitching motility two-component system response regulator PilH.
 
 0.843
SET08010.1
Two-component system, OmpR family, response regulator.
 0.833
SET62191.1
Two-component system, OmpR family, phosphate regulon response regulator PhoB.
 0.826
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.