STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SET84504.1Acyl dehydratase. (156 aa)    
Predicted Functional Partners:
SET18161.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.829
SES96582.1
Hypothetical protein.
    
  0.754
SET51221.1
Serine protease Do; Belongs to the peptidase S1C family.
    
  0.754
SET84517.1
DDE superfamily endonuclease.
       0.668
SES96125.1
Aspartate aminotransferase.
   
 
  0.658
SET65450.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.625
SET83418.1
Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family.
  
 
  0.622
SES66364.1
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.594
SES89008.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.594
SES89947.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.594
Your Current Organism:
Marinobacter segnicrescens
NCBI taxonomy Id: 430453
Other names: CGMCC 1.6489, LMG 23928, LMG:23928, M. segnicrescens, Marinobacter segnicrescens Guo et al. 2007, strain SS011B1-4
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